Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_1089 | hemH | DM42_1089 | DM42_1091 | annotation not available | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.881 |
| DM42_1185 | DM42_38 | DM42_1185 | DM42_38 | Protoporphyrinogen ix oxidase; Uncharacterized protein | annotation not available | 0.900 |
| DM42_1185 | DM42_5359 | DM42_1185 | DM42_5359 | Protoporphyrinogen ix oxidase; Uncharacterized protein | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | 0.800 |
| DM42_1185 | hemE | DM42_1185 | DM42_1671 | Protoporphyrinogen ix oxidase; Uncharacterized protein | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III | 0.505 |
| DM42_1185 | hemF | DM42_1185 | DM42_2765 | Protoporphyrinogen ix oxidase; Uncharacterized protein | annotation not available | 0.944 |
| DM42_1185 | hemH | DM42_1185 | DM42_1091 | Protoporphyrinogen ix oxidase; Uncharacterized protein | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.947 |
| DM42_38 | DM42_1185 | DM42_38 | DM42_1185 | annotation not available | Protoporphyrinogen ix oxidase; Uncharacterized protein | 0.900 |
| DM42_38 | DM42_5359 | DM42_38 | DM42_5359 | annotation not available | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | 0.900 |
| DM42_38 | hemE | DM42_38 | DM42_1671 | annotation not available | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III | 0.483 |
| DM42_38 | hemH | DM42_38 | DM42_1091 | annotation not available | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.927 |
| DM42_5359 | DM42_1185 | DM42_5359 | DM42_1185 | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | Protoporphyrinogen ix oxidase; Uncharacterized protein | 0.800 |
| DM42_5359 | DM42_38 | DM42_5359 | DM42_38 | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | annotation not available | 0.900 |
| DM42_5359 | hemF | DM42_5359 | DM42_2765 | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | annotation not available | 0.913 |
| DM42_5359 | hemH | DM42_5359 | DM42_1091 | Protoporphyrinogen ix oxidase; Conserved hypothetical protein | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.920 |
| bfr | hemH | DM42_2871 | DM42_1091 | Bacterioferritin; Iron-storage protein | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.944 |
| cyoE | hemB | DM42_2232 | DM42_1443 | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | Delta-aminolevulinic acid dehydratase family protein; Belongs to the ALAD family | 0.676 |
| cyoE | hemE | DM42_2232 | DM42_1671 | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III | 0.639 |
| cyoE | hemF | DM42_2232 | DM42_2765 | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | annotation not available | 0.721 |
| cyoE | hemH | DM42_2232 | DM42_1091 | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | Protoporphyrin/coproporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX | 0.953 |
| hemB | cyoE | DM42_1443 | DM42_2232 | Delta-aminolevulinic acid dehydratase family protein; Belongs to the ALAD family | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | 0.676 |
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