Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2525 | katE | DM42_2525 | DM42_7100 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide | 0.646 |
DM42_2525 | katG | DM42_2525 | DM42_1113 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | Catalase/peroxidase hpi; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity | 0.926 |
DM42_2525 | sodC | DM42_2525 | DM42_2635 | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems | annotation not available | 0.733 |
DM42_2856 | DM42_3611 | DM42_2856 | DM42_3611 | annotation not available | annotation not available | 0.807 |
DM42_2856 | DM42_5265 | DM42_2856 | DM42_5265 | annotation not available | annotation not available | 0.901 |
DM42_2856 | hisC | DM42_2856 | DM42_2264 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_2856 | hisC2 | DM42_2856 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_2856 | katG | DM42_2856 | DM42_1113 | annotation not available | Catalase/peroxidase hpi; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity | 0.900 |
DM42_2856 | phhA | DM42_2856 | DM42_1702 | annotation not available | Phe4hydrox_mono: phenylalanine-4-hydroxylase | 0.929 |
DM42_2856 | sodC | DM42_2856 | DM42_2635 | annotation not available | annotation not available | 0.431 |
DM42_3611 | DM42_2856 | DM42_3611 | DM42_2856 | annotation not available | annotation not available | 0.807 |
DM42_3611 | DM42_5265 | DM42_3611 | DM42_5265 | annotation not available | annotation not available | 0.901 |
DM42_3611 | hisC | DM42_3611 | DM42_2264 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_3611 | hisC2 | DM42_3611 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_3611 | katG | DM42_3611 | DM42_1113 | annotation not available | Catalase/peroxidase hpi; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity | 0.900 |
DM42_3611 | phhA | DM42_3611 | DM42_1702 | annotation not available | Phe4hydrox_mono: phenylalanine-4-hydroxylase | 0.929 |
DM42_3611 | sodC | DM42_3611 | DM42_2635 | annotation not available | annotation not available | 0.431 |
DM42_5265 | DM42_2856 | DM42_5265 | DM42_2856 | annotation not available | annotation not available | 0.901 |
DM42_5265 | DM42_3611 | DM42_5265 | DM42_3611 | annotation not available | annotation not available | 0.901 |
DM42_5265 | hisC | DM42_5265 | DM42_2264 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.900 |
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