STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1157annotation not available (220 aa)    
Predicted Functional Partners:
pgk
Belongs to the phosphoglycerate kinase family.
  
 
 0.922
eno
Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
    
 0.921
DM42_3173
Belongs to the glycerate kinase type-1 family.
  
 
 0.904
DM42_1878
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
    
 0.903
DM42_5385
annotation not available
    
 0.903
DM42_6234
annotation not available
    
 0.903
DM42_4652
annotation not available
   
 
  0.902
tpiA
Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P)
 
 
 0.880
gpmA
Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate
 
0.879
ppc
Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
  
  
 0.853
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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