Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1096 | DM42_1193 | DM42_1096 | DM42_1193 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.729 |
DM42_1096 | DM42_1888 | DM42_1096 | DM42_1888 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.604 |
DM42_1096 | DM42_2994 | DM42_1096 | DM42_2994 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.552 |
DM42_1096 | bamC | DM42_1096 | DM42_213 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.601 |
DM42_1096 | holA | DM42_1096 | DM42_1187 | Hypothetical protein; Uncharacterized protein | holA: DNA polymerase III, delta subunit | 0.407 |
DM42_1096 | lptA | DM42_1096 | DM42_2281 | Hypothetical protein; Uncharacterized protein | Lipopolysaccharide transport periplasmic protein lpta; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane | 0.430 |
DM42_1096 | lptC | DM42_1096 | DM42_2282 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.713 |
DM42_1096 | lptD | DM42_1096 | DM42_2361 | Hypothetical protein; Uncharacterized protein | Organic solvent tolerance family protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.619 |
DM42_1096 | lptE | DM42_1096 | DM42_1188 | Hypothetical protein; Uncharacterized protein | Lipopolysaccharide-assembly family protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane | 0.739 |
DM42_1193 | DM42_1096 | DM42_1193 | DM42_1096 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.729 |
DM42_1193 | DM42_2994 | DM42_1193 | DM42_2994 | annotation not available | annotation not available | 0.852 |
DM42_1193 | bamC | DM42_1193 | DM42_213 | annotation not available | annotation not available | 0.856 |
DM42_1193 | holA | DM42_1193 | DM42_1187 | annotation not available | holA: DNA polymerase III, delta subunit | 0.802 |
DM42_1193 | leuS | DM42_1193 | DM42_1189 | annotation not available | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | 0.580 |
DM42_1193 | lptC | DM42_1193 | DM42_2282 | annotation not available | annotation not available | 0.561 |
DM42_1193 | lptD | DM42_1193 | DM42_2361 | annotation not available | Organic solvent tolerance family protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.816 |
DM42_1193 | lptE | DM42_1193 | DM42_1188 | annotation not available | Lipopolysaccharide-assembly family protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane | 0.756 |
DM42_1888 | DM42_1096 | DM42_1888 | DM42_1096 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.604 |
DM42_1888 | DM42_2994 | DM42_1888 | DM42_2994 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.749 |
DM42_1888 | bamC | DM42_1888 | DM42_213 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.753 |
page 1 of 5