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STRINGSTRING
WL94_29255 protein (Burkholderia cepacia) - STRING interaction network
"WL94_29255" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_29255annotation not available (326 aa)    
Predicted Functional Partners:
WI67_08455
annotation not available (282 aa)
 
        0.892
DM42_13
annotation not available (310 aa)
              0.801
WL94_29265
Transposase (351 aa)
 
     
  0.738
WL94_29270
annotation not available (442 aa)
 
        0.630
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (343 aa)
 
       
  0.538
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (397 aa)
           
  0.536
WL94_29245
annotation not available (897 aa)
 
     
  0.525
DM42_8
annotation not available (191 aa)
 
          0.504
mqo
Probable malate-quinone oxidoreductase; Mal_quin_oxido- malate dehydrogenase (547 aa)
           
  0.493
DM42_5049
annotation not available (555 aa)
       
  0.481
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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