WL94_34885 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

WL94_34885

annotation not available (296 aa)

Predicted Functional Partners:

DM42_3932

0.699

WL94_13180

0.621

gno

0.568

DM42_6674

0.551

WL94_34865

0.500

DM42_4693

0.459

WI67_06180

0.450

WL94_00865

0.448

WL94_12810

0.443

DM42_5748

0.432

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_3932	DM42_5748	DM42_3932	DM42_5748	annotation not available	annotation not available	0.461
DM42_3932	DM42_6674	DM42_3932	DM42_6674	annotation not available	annotation not available	0.483
DM42_3932	WL94_34885	DM42_3932	DM42_1203	annotation not available	annotation not available	0.699
DM42_4693	DM42_5748	DM42_4693	DM42_5748	annotation not available	annotation not available	0.486
DM42_4693	DM42_6674	DM42_4693	DM42_6674	annotation not available	annotation not available	0.532
DM42_4693	WL94_34885	DM42_4693	DM42_1203	annotation not available	annotation not available	0.459
DM42_5748	DM42_3932	DM42_5748	DM42_3932	annotation not available	annotation not available	0.461
DM42_5748	DM42_4693	DM42_5748	DM42_4693	annotation not available	annotation not available	0.486
DM42_5748	WL94_34885	DM42_5748	DM42_1203	annotation not available	annotation not available	0.432
DM42_6674	DM42_3932	DM42_6674	DM42_3932	annotation not available	annotation not available	0.483
DM42_6674	DM42_4693	DM42_6674	DM42_4693	annotation not available	annotation not available	0.532
DM42_6674	WL94_13180	DM42_6674	DM42_7383	annotation not available	annotation not available	0.540
DM42_6674	WL94_34885	DM42_6674	DM42_1203	annotation not available	annotation not available	0.551
WI67_06180	WL94_34885	DM42_454	DM42_1203	annotation not available	annotation not available	0.450
WL94_00865	WL94_34885	DM42_5186	DM42_1203	annotation not available	annotation not available	0.448
WL94_12810	WL94_34885	DM42_3822	DM42_1203	annotation not available	annotation not available	0.443
WL94_13180	DM42_6674	DM42_7383	DM42_6674	annotation not available	annotation not available	0.540
WL94_13180	WL94_34885	DM42_7383	DM42_1203	annotation not available	annotation not available	0.621
WL94_34865	WL94_34885	DM42_1201	DM42_1203	annotation not available	annotation not available	0.500
WL94_34865	gno	DM42_1201	DM42_1202	annotation not available	annotation not available	0.884

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