Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1201 | DM42_1203 | DM42_1201 | DM42_1203 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.500 |
DM42_1201 | gno | DM42_1201 | DM42_1202 | annotation not available | Gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family | 0.987 |
DM42_1203 | DM42_1201 | DM42_1203 | DM42_1201 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.500 |
DM42_1203 | DM42_3822 | DM42_1203 | DM42_3822 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.444 |
DM42_1203 | DM42_3932 | DM42_1203 | DM42_3932 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.699 |
DM42_1203 | DM42_454 | DM42_1203 | DM42_454 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.450 |
DM42_1203 | DM42_4693 | DM42_1203 | DM42_4693 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.459 |
DM42_1203 | DM42_5186 | DM42_1203 | DM42_5186 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.450 |
DM42_1203 | DM42_5748 | DM42_1203 | DM42_5748 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.432 |
DM42_1203 | DM42_6674 | DM42_1203 | DM42_6674 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.551 |
DM42_1203 | DM42_7383 | DM42_1203 | DM42_7383 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.621 |
DM42_1203 | gno | DM42_1203 | DM42_1202 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family | 0.568 |
DM42_3822 | DM42_1203 | DM42_3822 | DM42_1203 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.444 |
DM42_3932 | DM42_1203 | DM42_3932 | DM42_1203 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.699 |
DM42_3932 | DM42_5748 | DM42_3932 | DM42_5748 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.461 |
DM42_3932 | DM42_6674 | DM42_3932 | DM42_6674 | annotation not available | annotation not available | 0.483 |
DM42_454 | DM42_1203 | DM42_454 | DM42_1203 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.450 |
DM42_4693 | DM42_1203 | DM42_4693 | DM42_1203 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.459 |
DM42_4693 | DM42_5748 | DM42_4693 | DM42_5748 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.486 |
DM42_4693 | DM42_6674 | DM42_4693 | DM42_6674 | annotation not available | annotation not available | 0.532 |
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