Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1231 | DM42_1233 | DM42_1231 | DM42_1233 | annotation not available | annotation not available | 0.593 |
DM42_1231 | DM42_1234 | DM42_1231 | DM42_1234 | annotation not available | annotation not available | 0.593 |
DM42_1231 | mpl | DM42_1231 | DM42_1232 | annotation not available | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | 0.893 |
DM42_1233 | DM42_1231 | DM42_1233 | DM42_1231 | annotation not available | annotation not available | 0.593 |
DM42_1233 | DM42_1234 | DM42_1233 | DM42_1234 | annotation not available | annotation not available | 0.880 |
DM42_1233 | accB | DM42_1233 | DM42_1236 | annotation not available | Acetyl-coa carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.455 |
DM42_1233 | aroQ | DM42_1233 | DM42_1235 | annotation not available | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate | 0.536 |
DM42_1233 | mpl | DM42_1233 | DM42_1232 | annotation not available | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | 0.605 |
DM42_1234 | DM42_1231 | DM42_1234 | DM42_1231 | annotation not available | annotation not available | 0.593 |
DM42_1234 | DM42_1233 | DM42_1234 | DM42_1233 | annotation not available | annotation not available | 0.880 |
DM42_1234 | accB | DM42_1234 | DM42_1236 | annotation not available | Acetyl-coa carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.595 |
DM42_1234 | aroQ | DM42_1234 | DM42_1235 | annotation not available | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate | 0.589 |
DM42_1234 | cyp18 | DM42_1234 | DM42_3006 | annotation not available | Peptidyl-prolyl cis-trans isomerase b (cyclophilin b); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides | 0.566 |
DM42_1234 | dsbD | DM42_1234 | DM42_1444 | annotation not available | annotation not available | 0.671 |
DM42_1234 | hisD | DM42_1234 | DM42_1396 | annotation not available | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine | 0.670 |
DM42_1234 | htpG | DM42_1234 | DM42_2714 | annotation not available | Histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein; Molecular chaperone. Has ATPase activity | 0.572 |
DM42_1234 | mpl | DM42_1234 | DM42_1232 | annotation not available | Udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate | 0.658 |
DM42_1234 | ypmQ_1 | DM42_1234 | DM42_2233 | annotation not available | annotation not available | 0.920 |
accB | DM42_1233 | DM42_1236 | DM42_1233 | Acetyl-coa carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | annotation not available | 0.455 |
accB | DM42_1234 | DM42_1236 | DM42_1234 | Acetyl-coa carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | annotation not available | 0.595 |
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