STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpxThioredoxin-dependent peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides (167 aa)    
Predicted Functional Partners:
DM42_1241
annotation not available
  
  
 0.897
polA
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
     
 0.802
DM42_156
annotation not available
  
  
 0.675
DM42_2035
Belongs to the carbohydrate kinase PfkB family
  
  
 0.675
pcp_4
annotation not available
 
     0.656
DM42_4837
annotation not available
   
  
 0.647
sucB
Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2)
     
 0.644
DM42_1239
MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein
       0.642
bsaA
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family
     
 0.634
prmA
Ribosomal protein l11 methyltransferase; Methylates ribosomal protein L11
       0.581
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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