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DM42_1325 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1325" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1325Conserved hypothetical protein (102 aa)    
Predicted Functional Partners:
WL94_16350
annotation not available (305 aa)
              0.589
WI67_20955
TIGR02594 family protein (136 aa)
 
     
  0.539
DM42_6223
annotation not available (108 aa)
   
          0.504
WL94_24795
annotation not available (121 aa)
   
          0.503
WI67_02325
ccmA- heme ABC exporter, ATP-binding protein CcmA (555 aa)
              0.502
WL94_27985
Uncharacterized protein (305 aa)
   
          0.499
WL94_21230
annotation not available (121 aa)
 
        0.498
WL94_00455
annotation not available (488 aa)
 
          0.493
WL94_15370
annotation not available (379 aa)
   
          0.484
WL94_34670
annotation not available (58 aa)
   
          0.478
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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