Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1126 | ygiD | DM42_1126 | DM42_1337 | Ycei-like domain protein; Belongs to the UPF0312 family | annotation not available | 0.478 |
DM42_2672 | DM42_6722 | DM42_2672 | DM42_6722 | annotation not available | annotation not available | 0.628 |
DM42_2672 | ygiD | DM42_2672 | DM42_1337 | annotation not available | annotation not available | 0.619 |
DM42_2864 | ygiD | DM42_2864 | DM42_1337 | Quercetin 2,3-dioxygenase; Belongs to the pirin family | annotation not available | 0.585 |
DM42_311 | ygiD | DM42_311 | DM42_1337 | Pirin family protein; Belongs to the pirin family | annotation not available | 0.549 |
DM42_570 | ygiD | DM42_570 | DM42_1337 | Quercetin 2,3-dioxygenase; Belongs to the pirin family | annotation not available | 0.483 |
DM42_6722 | DM42_2672 | DM42_6722 | DM42_2672 | annotation not available | annotation not available | 0.628 |
DM42_6722 | ygiD | DM42_6722 | DM42_1337 | annotation not available | annotation not available | 0.468 |
DM42_6722 | yhhW_4 | DM42_6722 | DM42_6564 | annotation not available | Quercetin 2,3-dioxygenase; Belongs to the pirin family | 0.615 |
grxD | ubiX | DM42_1335 | DM42_1336 | Monothiol glutaredoxin, grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily | Polyprenyl p-hydroxybenzoate and phenylacrylic acid decarboxylase family protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN | 0.866 |
grxD | ygiD | DM42_1335 | DM42_1337 | Monothiol glutaredoxin, grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily | annotation not available | 0.428 |
ubiX | grxD | DM42_1336 | DM42_1335 | Polyprenyl p-hydroxybenzoate and phenylacrylic acid decarboxylase family protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN | Monothiol glutaredoxin, grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily | 0.866 |
ubiX | ygiD | DM42_1336 | DM42_1337 | Polyprenyl p-hydroxybenzoate and phenylacrylic acid decarboxylase family protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN | annotation not available | 0.466 |
ygiD | DM42_1126 | DM42_1337 | DM42_1126 | annotation not available | Ycei-like domain protein; Belongs to the UPF0312 family | 0.478 |
ygiD | DM42_2672 | DM42_1337 | DM42_2672 | annotation not available | annotation not available | 0.619 |
ygiD | DM42_2864 | DM42_1337 | DM42_2864 | annotation not available | Quercetin 2,3-dioxygenase; Belongs to the pirin family | 0.585 |
ygiD | DM42_311 | DM42_1337 | DM42_311 | annotation not available | Pirin family protein; Belongs to the pirin family | 0.549 |
ygiD | DM42_570 | DM42_1337 | DM42_570 | annotation not available | Quercetin 2,3-dioxygenase; Belongs to the pirin family | 0.483 |
ygiD | DM42_6722 | DM42_1337 | DM42_6722 | annotation not available | annotation not available | 0.468 |
ygiD | grxD | DM42_1337 | DM42_1335 | annotation not available | Monothiol glutaredoxin, grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily | 0.428 |
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