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DM42_1347 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1347" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1347Conserved hypothetical protein (110 aa)    
Predicted Functional Partners:
WI67_09995
annotation not available (156 aa)
   
        0.829
hchA
annotation not available (293 aa)
   
        0.743
WL94_28810
annotation not available (559 aa)
     
        0.691
DM42_3218
annotation not available (96 aa)
   
        0.674
WL94_27515
annotation not available (442 aa)
   
        0.673
DM42_6970
annotation not available (347 aa)
   
        0.656
WI67_08015
prkA serine kinase C-terminal domain protein (640 aa)
     
        0.630
WI67_12680
annotation not available (151 aa)
   
        0.617
WI67_08020
UPF0229 protein WI67_08020; Belongs to the UPF0229 family (422 aa)
     
        0.574
otsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (250 aa)
     
        0.535
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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