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DM42_1354 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1354" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1354annotation not available (330 aa)    
Predicted Functional Partners:
WI67_02175
Type VI secretion protein (329 aa)
 
          0.796
WL94_16200
annotation not available (203 aa)
 
          0.790
DM42_1367
annotation not available (208 aa)
   
          0.772
WL94_16135
annotation not available (199 aa)
   
          0.736
WL94_02865
Uncharacterized protein (476 aa)
   
          0.712
WL94_32760
annotation not available (596 aa)
   
          0.707
DM42_4395
annotation not available (439 aa)
   
          0.705
DM42_1358
annotation not available (316 aa)
 
          0.702
WI67_28590
annotation not available (108 aa)
   
          0.697
WI67_02180
annotation not available (1314 aa)
 
          0.688
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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