STRINGSTRING
WL94_16200 protein (Burkholderia cepacia) - STRING interaction network
"WL94_16200" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_16200annotation not available (203 aa)    
Predicted Functional Partners:
WI67_02180
annotation not available (1314 aa)
 
   
  0.917
WI67_02175
Type VI secretion protein (329 aa)
 
   
  0.910
DM42_1358
annotation not available (316 aa)
 
   
  0.894
WL94_16125
IV_VI_DotU- type IV/VI secretion system , DotU family domain protein (260 aa)
 
   
  0.880
WI67_02165
Type VI secretion protein ImpA; impA-related N-terminal family protein (373 aa)
 
        0.840
WI67_02115
Type VI secretion protein (448 aa)
 
        0.828
DM42_1364
VI_effect_Hcp1- type VI secretion system effector, Hcp1 family protein (167 aa)
 
          0.791
DM42_1354
annotation not available (330 aa)
 
          0.790
DM42_1874
annotation not available (172 aa)
 
   
  0.790
DM42_2884
vgr_GE- Rhs element Vgr family protein (902 aa)
 
          0.789
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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