Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aat | bpt | DM42_137 | DM42_138 | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.984 |
| aat | nudC_1 | DM42_137 | DM42_136 | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Nudix domain protein; Belongs to the Nudix hydrolase family | 0.881 |
| aat | pyrD | DM42_137 | DM42_139 | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | 0.723 |
| bpt | aat | DM42_138 | DM42_137 | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.984 |
| bpt | nudC_1 | DM42_138 | DM42_136 | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | Nudix domain protein; Belongs to the Nudix hydrolase family | 0.832 |
| bpt | pyrD | DM42_138 | DM42_139 | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | 0.723 |
| gmd | nudC_1 | DM42_4084 | DM42_136 | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | Nudix domain protein; Belongs to the Nudix hydrolase family | 0.435 |
| hisZ | nudC_1 | DM42_3298 | DM42_136 | Atp phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine | Nudix domain protein; Belongs to the Nudix hydrolase family | 0.425 |
| nudC_1 | aat | DM42_136 | DM42_137 | Nudix domain protein; Belongs to the Nudix hydrolase family | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.881 |
| nudC_1 | bpt | DM42_136 | DM42_138 | Nudix domain protein; Belongs to the Nudix hydrolase family | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.832 |
| nudC_1 | gmd | DM42_136 | DM42_4084 | Nudix domain protein; Belongs to the Nudix hydrolase family | Gdpmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose | 0.435 |
| nudC_1 | hisZ | DM42_136 | DM42_3298 | Nudix domain protein; Belongs to the Nudix hydrolase family | Atp phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine | 0.425 |
| nudC_1 | pyrD | DM42_136 | DM42_139 | Nudix domain protein; Belongs to the Nudix hydrolase family | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | 0.689 |
| pyrD | aat | DM42_139 | DM42_137 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | Leucyl/phenylalanyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.723 |
| pyrD | bpt | DM42_139 | DM42_138 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | Leucyl-trna---protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.723 |
| pyrD | nudC_1 | DM42_139 | DM42_136 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | Nudix domain protein; Belongs to the Nudix hydrolase family | 0.689 |
