Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_1355 | DM42_1356 | annotation not available | annotation not available | 0.910 |
DM42_1355 | DM42_1359 | annotation not available | Type VI secretion protein ImpA; impA-related N-terminal family protein | 0.837 |
DM42_1355 | DM42_1361 | annotation not available | Type vi secretion system protein imph; Type VI secretion protein | 0.783 |
DM42_1355 | DM42_1363 | annotation not available | annotation not available | 0.782 |
DM42_1355 | DM42_1364 | annotation not available | VI_effect_Hcp1: type VI secretion system effector, Hcp1 family protein | 0.791 |
DM42_1355 | DM42_1365 | annotation not available | Type vi secretion system protein impc; EvpB family type VI secretion protein | 0.750 |
DM42_1355 | DM42_1366 | annotation not available | Type vi secretion system protein impb; Type VI secretion protein | 0.766 |
DM42_1355 | DM42_1368 | annotation not available | annotation not available | 0.781 |
DM42_1355 | DM42_1369 | annotation not available | Type vi secretion system protein impj; Type VI secretion protein | 0.827 |
DM42_1355 | DM42_1370 | annotation not available | IV_VI_DotU: type IV/VI secretion system , DotU family domain protein | 0.880 |
DM42_1356 | DM42_1355 | annotation not available | annotation not available | 0.910 |
DM42_1356 | DM42_1359 | annotation not available | Type VI secretion protein ImpA; impA-related N-terminal family protein | 0.886 |
DM42_1356 | DM42_1361 | annotation not available | Type vi secretion system protein imph; Type VI secretion protein | 0.875 |
DM42_1356 | DM42_1363 | annotation not available | annotation not available | 0.887 |
DM42_1356 | DM42_1364 | annotation not available | VI_effect_Hcp1: type VI secretion system effector, Hcp1 family protein | 0.882 |
DM42_1356 | DM42_1365 | annotation not available | Type vi secretion system protein impc; EvpB family type VI secretion protein | 0.889 |
DM42_1356 | DM42_1366 | annotation not available | Type vi secretion system protein impb; Type VI secretion protein | 0.876 |
DM42_1356 | DM42_1368 | annotation not available | annotation not available | 0.866 |
DM42_1356 | DM42_1369 | annotation not available | Type vi secretion system protein impj; Type VI secretion protein | 0.886 |
DM42_1356 | DM42_1370 | annotation not available | IV_VI_DotU: type IV/VI secretion system , DotU family domain protein | 0.915 |
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