Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_140 | bpt | DM42_140 | DM42_138 | Belongs to the bacterial solute-binding protein 3 family. | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.416 |
| DM42_140 | pyrD | DM42_140 | DM42_139 | Belongs to the bacterial solute-binding protein 3 family. | Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | 0.586 |
| DM42_2662 | bpt | DM42_2662 | DM42_138 | annotation not available | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.464 |
| DM42_2793 | bpt | DM42_2793 | DM42_138 | annotation not available | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.407 |
| DM42_3188 | bpt | DM42_3188 | DM42_138 | annotation not available | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.467 |
| DM42_3854 | bpt | DM42_3854 | DM42_138 | annotation not available | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.446 |
| aat | bpt | DM42_137 | DM42_138 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | 0.984 |
| aat | clpA | DM42_137 | DM42_2549 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Belongs to the ClpA/ClpB family. | 0.733 |
| aat | clpS | DM42_137 | DM42_2548 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | 0.859 |
| aat | nudC_1 | DM42_137 | DM42_136 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Belongs to the Nudix hydrolase family. | 0.881 |
| aat | pyrD | DM42_137 | DM42_139 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor | 0.723 |
| bpt | DM42_140 | DM42_138 | DM42_140 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | Belongs to the bacterial solute-binding protein 3 family. | 0.416 |
| bpt | DM42_2662 | DM42_138 | DM42_2662 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | annotation not available | 0.464 |
| bpt | DM42_2793 | DM42_138 | DM42_2793 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | annotation not available | 0.407 |
| bpt | DM42_3188 | DM42_138 | DM42_3188 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | annotation not available | 0.467 |
| bpt | DM42_3854 | DM42_138 | DM42_3854 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | annotation not available | 0.446 |
| bpt | aat | DM42_138 | DM42_137 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.984 |
| bpt | clpA | DM42_138 | DM42_2549 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | Belongs to the ClpA/ClpB family. | 0.490 |
| bpt | clpS | DM42_138 | DM42_2548 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | 0.534 |
| bpt | nudC_1 | DM42_138 | DM42_136 | Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. | Belongs to the Nudix hydrolase family. | 0.832 |
page 1 of 2
