Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1400 | DM42_1401 | DM42_1400 | DM42_1401 | annotation not available | annotation not available | 0.990 |
DM42_1400 | DM42_1407 | DM42_1400 | DM42_1407 | annotation not available | annotation not available | 0.540 |
DM42_1400 | hisC2 | DM42_1400 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.564 |
DM42_1400 | hisD | DM42_1400 | DM42_1396 | annotation not available | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine | 0.634 |
DM42_1400 | hisG | DM42_1400 | DM42_1397 | annotation not available | Atp phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity | 0.655 |
DM42_1400 | mlaD | DM42_1400 | DM42_1405 | annotation not available | annotation not available | 0.560 |
DM42_1400 | mlaE | DM42_1400 | DM42_1406 | annotation not available | Phospholipid/cholesterol/gamma-hch transport system permease protein; ABC transporter permease | 0.679 |
DM42_1400 | murA | DM42_1400 | DM42_1398 | annotation not available | Udp-n-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | 0.655 |
DM42_1400 | yrbA | DM42_1400 | DM42_1399 | annotation not available | Bola-like family protein; Belongs to the BolA/IbaG family | 0.785 |
DM42_1401 | DM42_1400 | DM42_1401 | DM42_1400 | annotation not available | annotation not available | 0.990 |
DM42_1401 | DM42_1407 | DM42_1401 | DM42_1407 | annotation not available | annotation not available | 0.599 |
DM42_1401 | hisC2 | DM42_1401 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.573 |
DM42_1401 | hisD | DM42_1401 | DM42_1396 | annotation not available | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine | 0.668 |
DM42_1401 | hisG | DM42_1401 | DM42_1397 | annotation not available | Atp phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity | 0.673 |
DM42_1401 | mlaD | DM42_1401 | DM42_1405 | annotation not available | annotation not available | 0.555 |
DM42_1401 | mlaE | DM42_1401 | DM42_1406 | annotation not available | Phospholipid/cholesterol/gamma-hch transport system permease protein; ABC transporter permease | 0.540 |
DM42_1401 | murA | DM42_1401 | DM42_1398 | annotation not available | Udp-n-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | 0.655 |
DM42_1401 | yrbA | DM42_1401 | DM42_1399 | annotation not available | Bola-like family protein; Belongs to the BolA/IbaG family | 0.788 |
DM42_1407 | DM42_1400 | DM42_1407 | DM42_1400 | annotation not available | annotation not available | 0.540 |
DM42_1407 | DM42_1401 | DM42_1407 | DM42_1401 | annotation not available | annotation not available | 0.599 |
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