Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1082 | dgt | DM42_1082 | DM42_1427 | annotation not available | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 0.900 |
DM42_4682 | SurE | DM42_4682 | DM42_4786 | annotation not available | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 0.800 |
DM42_4682 | dgt | DM42_4682 | DM42_1427 | annotation not available | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 0.903 |
DM42_4682 | surE | DM42_4682 | DM42_3277 | annotation not available | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 0.800 |
SurE | DM42_4682 | DM42_4786 | DM42_4682 | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | annotation not available | 0.800 |
SurE | dgt | DM42_4786 | DM42_1427 | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 0.931 |
SurE | surE | DM42_4786 | DM42_3277 | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 0.829 |
aroB | aroK | DM42_1428 | DM42_1429 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | 0.999 |
aroB | dgt | DM42_1428 | DM42_1427 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 0.808 |
aroB | pilQ | DM42_1428 | DM42_1430 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | IV_pilus_PilQ: type IV pilus secretin PilQ family protein | 0.772 |
aroB | ugpB | DM42_1428 | DM42_1426 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | annotation not available | 0.507 |
aroK | aroB | DM42_1429 | DM42_1428 | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | 0.999 |
aroK | dgt | DM42_1429 | DM42_1427 | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 0.808 |
aroK | pilQ | DM42_1429 | DM42_1430 | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | IV_pilus_PilQ: type IV pilus secretin PilQ family protein | 0.739 |
aroK | ugpB | DM42_1429 | DM42_1426 | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | annotation not available | 0.507 |
dgt | DM42_1082 | DM42_1427 | DM42_1082 | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | annotation not available | 0.900 |
dgt | DM42_4682 | DM42_1427 | DM42_4682 | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | annotation not available | 0.903 |
dgt | SurE | DM42_1427 | DM42_4786 | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates | 0.931 |
dgt | aroB | DM42_1427 | DM42_1428 | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) | 0.808 |
dgt | aroK | DM42_1427 | DM42_1429 | Dgtpase family protein; Belongs to the dGTPase family. Type 2 subfamily | Shikimate kinase family protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | 0.808 |
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