node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
nusG | rho | DM42_1486 | DM42_3271 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | 0.981 |
nusG | rplK | DM42_1486 | DM42_1485 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Large subunit ribosomal protein l11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors | 0.984 |
nusG | rpoA | DM42_1486 | DM42_1447 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Dna-directed rna polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.991 |
nusG | rpoB | DM42_1486 | DM42_1481 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Dna-directed rna polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.992 |
nusG | rpoC | DM42_1486 | DM42_1480 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Dna-directed rna polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.991 |
nusG | rpoZ | DM42_1486 | DM42_836 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Dna-directed rna polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits | 0.961 |
nusG | rpsC | DM42_1486 | DM42_1467 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | 0.974 |
nusG | rpsD | DM42_1486 | DM42_1448 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Small subunit ribosomal protein s4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.980 |
nusG | rpsG | DM42_1486 | DM42_1477 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Small subunit ribosomal protein s7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA | 0.962 |
nusG | secE | DM42_1486 | DM42_1487 | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | Preprotein translocase, sece subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation | 0.986 |
rho | nusG | DM42_3271 | DM42_1486 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | 0.981 |
rho | rpoA | DM42_3271 | DM42_1447 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Dna-directed rna polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.765 |
rho | rpoB | DM42_3271 | DM42_1481 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Dna-directed rna polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.864 |
rho | rpoC | DM42_3271 | DM42_1480 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Dna-directed rna polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.877 |
rho | rpoZ | DM42_3271 | DM42_836 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Dna-directed rna polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits | 0.759 |
rho | rpsC | DM42_3271 | DM42_1467 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | 0.479 |
rho | rpsD | DM42_3271 | DM42_1448 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Small subunit ribosomal protein s4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.513 |
rho | secE | DM42_3271 | DM42_1487 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template | Preprotein translocase, sece subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation | 0.536 |
rplK | nusG | DM42_1485 | DM42_1486 | Large subunit ribosomal protein l11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors | Transcription termination/antitermination protein nusg; Participates in transcription elongation, termination and antitermination | 0.984 |
rplK | rpoA | DM42_1485 | DM42_1447 | Large subunit ribosomal protein l11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors | Dna-directed rna polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.978 |