Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1569 | DM42_1570 | DM42_1569 | DM42_1570 | annotation not available | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | 0.994 |
DM42_1569 | DM42_255 | DM42_1569 | DM42_255 | annotation not available | Methyl-accepting chemotaxis protein; Chemotaxis protein | 0.965 |
DM42_1569 | DM42_5409 | DM42_1569 | DM42_5409 | annotation not available | annotation not available | 0.982 |
DM42_1569 | DM42_5980 | DM42_1569 | DM42_5980 | annotation not available | annotation not available | 0.965 |
DM42_1569 | aer | DM42_1569 | DM42_5411 | annotation not available | annotation not available | 0.982 |
DM42_1569 | cheA | DM42_1569 | DM42_1572 | annotation not available | annotation not available | 0.998 |
DM42_1569 | cheB | DM42_1569 | DM42_1567 | annotation not available | Two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid | 0.998 |
DM42_1569 | cheD | DM42_1569 | DM42_1568 | annotation not available | Ched chemotactic sensory transduction family protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis | 0.980 |
DM42_1569 | cheW | DM42_1569 | DM42_1571 | annotation not available | annotation not available | 0.998 |
DM42_1570 | DM42_1569 | DM42_1570 | DM42_1569 | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | annotation not available | 0.994 |
DM42_1570 | cheA | DM42_1570 | DM42_1572 | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | annotation not available | 0.999 |
DM42_1570 | cheB | DM42_1570 | DM42_1567 | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | Two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid | 0.989 |
DM42_1570 | cheD | DM42_1570 | DM42_1568 | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | Ched chemotactic sensory transduction family protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis | 0.986 |
DM42_1570 | cheW | DM42_1570 | DM42_1571 | Methyl-accepting chemotaxis protein i, serine sensor receptor; Chemotaxis protein | annotation not available | 0.996 |
DM42_255 | DM42_1569 | DM42_255 | DM42_1569 | Methyl-accepting chemotaxis protein; Chemotaxis protein | annotation not available | 0.965 |
DM42_255 | cheA | DM42_255 | DM42_1572 | Methyl-accepting chemotaxis protein; Chemotaxis protein | annotation not available | 0.999 |
DM42_255 | cheB | DM42_255 | DM42_1567 | Methyl-accepting chemotaxis protein; Chemotaxis protein | Two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid | 0.932 |
DM42_255 | cheD | DM42_255 | DM42_1568 | Methyl-accepting chemotaxis protein; Chemotaxis protein | Ched chemotactic sensory transduction family protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis | 0.919 |
DM42_255 | cheW | DM42_255 | DM42_1571 | Methyl-accepting chemotaxis protein; Chemotaxis protein | annotation not available | 0.987 |
DM42_5409 | DM42_1569 | DM42_5409 | DM42_1569 | annotation not available | annotation not available | 0.982 |
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