Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_1584 | DM42_1585 | annotation not available | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.746 |
DM42_1584 | DM42_339 | annotation not available | annotation not available | 0.467 |
DM42_1585 | DM42_1584 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.746 |
DM42_1585 | DM42_339 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.466 |
DM42_1585 | DM42_3484 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.467 |
DM42_1585 | DM42_4357 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.432 |
DM42_1585 | DM42_4426 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.455 |
DM42_1585 | DM42_4531 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | Periplasmic protein tonb; tonB_Cterm: TonB family C-terminal domain protein | 0.479 |
DM42_1585 | DM42_5340 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Uncharacterized protein | 0.588 |
DM42_1585 | DM42_5765 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.567 |
DM42_1585 | DM42_5771 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.425 |
DM42_1585 | DM42_6182 | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.448 |
DM42_339 | DM42_1584 | annotation not available | annotation not available | 0.467 |
DM42_339 | DM42_1585 | annotation not available | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.466 |
DM42_339 | DM42_5771 | annotation not available | annotation not available | 0.611 |
DM42_3484 | DM42_1585 | annotation not available | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.467 |
DM42_3484 | DM42_4531 | annotation not available | Periplasmic protein tonb; tonB_Cterm: TonB family C-terminal domain protein | 0.519 |
DM42_3484 | DM42_5765 | annotation not available | Non-ribosomal peptide synthetase; AA-adenyl-dom: amino acid adenylation domain protein | 0.494 |
DM42_3484 | DM42_6182 | annotation not available | annotation not available | 0.503 |
DM42_4357 | DM42_1585 | annotation not available | Ligand-gated channel protein; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.432 |
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