Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_5533 | WL94_28005 | DM42_5533 | DM42_159 | annotation not available | annotation not available | 0.573 |
DM42_5533 | pvdA | DM42_5533 | DM42_51 | annotation not available | L-ornithine N(5)-monooxygenase; Catalyzes the conversion of L-ornithine to N(5)- hydroxyornithine, the first step in the biosynthesis of all hydroxamate-containing siderophores, such as ornibactin | 0.432 |
DM42_5533 | rpsD | DM42_5533 | DM42_1448 | annotation not available | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.407 |
DM42_6034 | WL94_28005 | DM42_6034 | DM42_159 | annotation not available | annotation not available | 0.762 |
WI67_07615 | WL94_28005 | DM42_160 | DM42_159 | annotation not available | annotation not available | 0.430 |
WI67_07625 | WL94_28005 | DM42_158 | DM42_159 | Chromosome partitioning protein ParB | annotation not available | 0.539 |
WI67_07625 | WL94_28015 | DM42_158 | DM42_157 | Chromosome partitioning protein ParB | annotation not available | 0.851 |
WL94_28005 | DM42_5533 | DM42_159 | DM42_5533 | annotation not available | annotation not available | 0.573 |
WL94_28005 | DM42_6034 | DM42_159 | DM42_6034 | annotation not available | annotation not available | 0.762 |
WL94_28005 | WI67_07615 | DM42_159 | DM42_160 | annotation not available | annotation not available | 0.430 |
WL94_28005 | WI67_07625 | DM42_159 | DM42_158 | annotation not available | Chromosome partitioning protein ParB | 0.539 |
WL94_28005 | WL94_28015 | DM42_159 | DM42_157 | annotation not available | annotation not available | 0.498 |
WL94_28005 | pvdA | DM42_159 | DM42_51 | annotation not available | L-ornithine N(5)-monooxygenase; Catalyzes the conversion of L-ornithine to N(5)- hydroxyornithine, the first step in the biosynthesis of all hydroxamate-containing siderophores, such as ornibactin | 0.438 |
WL94_28005 | rpsD | DM42_159 | DM42_1448 | annotation not available | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.407 |
WL94_28015 | WI67_07625 | DM42_157 | DM42_158 | annotation not available | Chromosome partitioning protein ParB | 0.851 |
WL94_28015 | WL94_28005 | DM42_157 | DM42_159 | annotation not available | annotation not available | 0.498 |
pvdA | DM42_5533 | DM42_51 | DM42_5533 | L-ornithine N(5)-monooxygenase; Catalyzes the conversion of L-ornithine to N(5)- hydroxyornithine, the first step in the biosynthesis of all hydroxamate-containing siderophores, such as ornibactin | annotation not available | 0.432 |
pvdA | WL94_28005 | DM42_51 | DM42_159 | L-ornithine N(5)-monooxygenase; Catalyzes the conversion of L-ornithine to N(5)- hydroxyornithine, the first step in the biosynthesis of all hydroxamate-containing siderophores, such as ornibactin | annotation not available | 0.438 |
rpsD | DM42_5533 | DM42_1448 | DM42_5533 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | annotation not available | 0.407 |
rpsD | WL94_28005 | DM42_1448 | DM42_159 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | annotation not available | 0.407 |