• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DM42_1590 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1590" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1590annotation not available (781 aa)    
Predicted Functional Partners:
DM42_1591
annotation not available (381 aa)
 
     
  0.856
DM42_1592
annotation not available (232 aa)
   
      0.801
DM42_1593
Conserved hypothetical protein (320 aa)
         
  0.786
DM42_1594
annotation not available (425 aa)
              0.641
DM42_1061
annotation not available (983 aa)
   
 
  0.639
DM42_5776
annotation not available (437 aa)
   
 
  0.630
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (809 aa)
   
 
  0.582
WL94_20015
annotation not available (611 aa)
 
0.555
DM42_5558
fkbM_fam- methyltransferase, FkbM family domain protein (657 aa)
 
     
  0.551
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (874 aa)
   
 
  0.550
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (17%) [HD]