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DM42_1595 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1595" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1595annotation not available (230 aa)    
Predicted Functional Partners:
DM42_1593
Conserved hypothetical protein (320 aa)
 
 
 
  0.684
DM42_1591
annotation not available (381 aa)
     
 
  0.623
DM42_1594
annotation not available (425 aa)
 
          0.607
hpnH
annotation not available (386 aa)
 
 
 
  0.507
DM42_1592
annotation not available (232 aa)
 
     
  0.479
WL94_31635
annotation not available (383 aa)
     
 
  0.453
DM42_1590
annotation not available (781 aa)
   
 
  0.444
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; Belongs to the universal ribosomal protein uS5 family (172 aa)
     
 
  0.437
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (91 aa)
     
 
  0.437
pqqE
PQQ_syn_pqqE- coenzyme PQQ biosynthesis enzyme PqqE; Belongs to the radical SAM superfamily. PqqE family (379 aa)
     
 
  0.434
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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