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DM42_1652 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1652" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1652annotation not available (125 aa)    
Predicted Functional Partners:
DM42_1653
ATPase-IB1_Cu- copper-translocating P-type ATPase (840 aa)
              0.859
DM42_3783
Conserved hypothetical protein (889 aa)
   
          0.773
DM42_2944
Conserved hypothetical protein (267 aa)
   
          0.748
DM42_7197
Conserved hypothetical protein (724 aa)
   
          0.734
WL94_36950
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (185 aa)
   
          0.652
DM42_6319
Conserved hypothetical protein (78 aa)
   
          0.640
DM42_7231
Conserved hypothetical protein (143 aa)
   
          0.612
DM42_7212
Conserved hypothetical protein (722 aa)
   
          0.602
WI67_00720
cadR-PbrR- Cd(II)/Pb(II)-responsive transcriptional regulator (143 aa)
              0.602
DM42_7070
annotation not available (387 aa)
   
          0.568
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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