Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_1379 | atpA | DM42_1379 | DM42_1677 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | 0.679 |
| DM42_1379 | atpB | DM42_1379 | DM42_1681 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | F-type h+-transporting atpase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane | 0.937 |
| DM42_1379 | atpC | DM42_1379 | DM42_1674 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | 0.526 |
| DM42_1379 | atpF | DM42_1379 | DM42_1679 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | F-type h+-transporting atpase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) | 0.681 |
| DM42_1379 | atpG | DM42_1379 | DM42_1676 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | F-type h+-transporting atpase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex | 0.404 |
| DM42_1682 | atpA | DM42_1682 | DM42_1677 | annotation not available | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | 0.946 |
| DM42_1682 | atpB | DM42_1682 | DM42_1681 | annotation not available | F-type h+-transporting atpase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane | 0.979 |
| DM42_1682 | atpC | DM42_1682 | DM42_1674 | annotation not available | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | 0.939 |
| DM42_1682 | atpD | DM42_1682 | DM42_1675 | annotation not available | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.936 |
| DM42_1682 | atpE | DM42_1682 | DM42_1680 | annotation not available | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation | 0.969 |
| DM42_1682 | atpF | DM42_1682 | DM42_1679 | annotation not available | F-type h+-transporting atpase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) | 0.951 |
| DM42_1682 | atpG | DM42_1682 | DM42_1676 | annotation not available | F-type h+-transporting atpase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex | 0.939 |
| DM42_1682 | atpH | DM42_1682 | DM42_1678 | annotation not available | F-type h+-transporting atpase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation | 0.952 |
| atpA | DM42_1379 | DM42_1677 | DM42_1379 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | 0.679 |
| atpA | DM42_1682 | DM42_1677 | DM42_1682 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | annotation not available | 0.946 |
| atpA | atpB | DM42_1677 | DM42_1681 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | F-type h+-transporting atpase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane | 0.999 |
| atpA | atpC | DM42_1677 | DM42_1674 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | 0.999 |
| atpA | atpD | DM42_1677 | DM42_1675 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.999 |
| atpA | atpE | DM42_1677 | DM42_1680 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation | 0.999 |
| atpA | atpF | DM42_1677 | DM42_1679 | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | F-type h+-transporting atpase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) | 0.999 |
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