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gspD protein (Burkholderia cepacia) - STRING interaction network
"gspD" - type_II_gspD: type II secretion system protein D in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspDtype_II_gspD- type II secretion system protein D (770 aa)    
Predicted Functional Partners:
gspF
gspF- type II secretion system protein F (405 aa)
 
   
  0.979
gspE
type_II_gspE- type II secretion system protein E (499 aa)
 
   
  0.974
gspG
typeII_sec_gspG- type II secretion system protein G (150 aa)
     
  0.858
gspI
gspI- type II secretion system protein I (133 aa)
 
     
  0.836
DM42_1725
annotation not available (369 aa)
 
   
  0.826
gspH
typeII_sec_gspH- type II secretion system protein H (157 aa)
 
     
  0.810
WL94_35195
annotation not available (424 aa)
 
   
  0.778
DM42_1263
annotation not available (401 aa)
 
   
  0.768
outO
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (303 aa)
 
   
  0.766
WL94_03795
annotation not available (262 aa)
 
          0.753
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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