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STRINGSTRING
gspE protein (Burkholderia cepacia) - STRING interaction network
"gspE" - type_II_gspE: type II secretion system protein E in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspEtype_II_gspE- type II secretion system protein E (499 aa)    
Predicted Functional Partners:
gspF
gspF- type II secretion system protein F (405 aa)
 
 
  0.987
gspD
type_II_gspD- type II secretion system protein D (770 aa)
 
   
  0.974
DM42_1263
annotation not available (401 aa)
 
 
  0.925
pilQ
IV_pilus_PilQ- type IV pilus secretin PilQ family protein (541 aa)
 
 
  0.889
outO
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (303 aa)
 
   
  0.864
gspG
typeII_sec_gspG- type II secretion system protein G (150 aa)
 
 
  0.831
gspL
typeII_sec_gspL- type II secretion system protein L (457 aa)
 
 
  0.684
DM42_2977
comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 (826 aa)
   
   
  0.676
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (553 aa)
         
  0.631
DM42_1431
Conserved hypothetical protein (288 aa)
   
 
  0.623
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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