STRINGSTRING
WI67_00230 protein (Burkholderia cepacia) - STRING interaction network
"WI67_00230" - Porin in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_00230Porin; OMP85_target- outer membrane insertion C-terminal signal domain protein (375 aa)    
Predicted Functional Partners:
DM42_5271
Conserved hypothetical protein (175 aa)
   
          0.730
WL94_21680
DUF4440 domain-containing protein (131 aa)
   
          0.711
WL94_06205
annotation not available (481 aa)
   
          0.634
WL94_25550
annotation not available (558 aa)
   
          0.632
WL94_05240
annotation not available (168 aa)
   
          0.612
WL94_03885
annotation not available (455 aa)
 
          0.587
WL94_26220
annotation not available (488 aa)
   
          0.581
DM42_5537
annotation not available (642 aa)
   
          0.569
WL94_02865
Uncharacterized protein (476 aa)
   
          0.562
WL94_06810
annotation not available (644 aa)
   
          0.557
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (21%) [HD]