Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_1076 | DM42_1750 | Hypothetical protein; DUF4440 domain-containing protein | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.711 |
DM42_1076 | DM42_3517 | Hypothetical protein; DUF4440 domain-containing protein | annotation not available | 0.451 |
DM42_1076 | DM42_5271 | Hypothetical protein; DUF4440 domain-containing protein | Conserved hypothetical protein | 0.675 |
DM42_1076 | DM42_5299 | Hypothetical protein; DUF4440 domain-containing protein | annotation not available | 0.486 |
DM42_1076 | DM42_6213 | Hypothetical protein; DUF4440 domain-containing protein | annotation not available | 0.549 |
DM42_1358 | DM42_1750 | annotation not available | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.636 |
DM42_1358 | DM42_6365 | annotation not available | annotation not available | 0.596 |
DM42_1750 | DM42_1076 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | Hypothetical protein; DUF4440 domain-containing protein | 0.711 |
DM42_1750 | DM42_1358 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | annotation not available | 0.636 |
DM42_1750 | DM42_2010 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | Hypothetical protein; Uncharacterized protein | 0.620 |
DM42_1750 | DM42_2255 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | Lipid a 3-o-deacylase family protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety | 0.620 |
DM42_1750 | DM42_3517 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | annotation not available | 0.634 |
DM42_1750 | DM42_4725 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | Conserved hypothetical protein | 0.620 |
DM42_1750 | DM42_5271 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | Conserved hypothetical protein | 0.730 |
DM42_1750 | DM42_5299 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | annotation not available | 0.632 |
DM42_1750 | DM42_6213 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | annotation not available | 0.612 |
DM42_1750 | DM42_6365 | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | annotation not available | 0.641 |
DM42_2010 | DM42_1750 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.620 |
DM42_2010 | DM42_6365 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.744 |
DM42_2255 | DM42_1750 | Lipid a 3-o-deacylase family protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety | Hypothetical protein; Porin; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.620 |
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