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DM42_1782 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1782" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1782Conserved hypothetical protein (635 aa)    
Predicted Functional Partners:
DM42_1781
Conserved hypothetical protein (517 aa)
 
          0.969
DM42_1780
annotation not available (1811 aa)
 
     
  0.968
DM42_1779
annotation not available (348 aa)
   
        0.853
DM42_1773
annotation not available (805 aa)
   
   
  0.797
DM42_1772
Conserved hypothetical protein (282 aa)
 
          0.789
DM42_1774
annotation not available (280 aa)
 
          0.757
DM42_1572
annotation not available (751 aa)
           
  0.541
WI67_21370
annotation not available (113 aa)
       
 
  0.521
DM42_4156
annotation not available (203 aa)
   
 
  0.519
DM42_5776
annotation not available (437 aa)
   
 
  0.500
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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