STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_37940phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (484 aa)    
Predicted Functional Partners:
WL94_31990
hydr_PhnA: phosphonoacetate hydrolase
 
  
 0.898
WL94_02755
hydr_PhnA: phosphonoacetate hydrolase
 
  
 0.589
WL94_22175
annotation not available
  
   0.528
WL94_31995
phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein
 
     0.524
WL94_32010
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
 
  
 0.492
WL94_35425
annotation not available
   
   0.480
WL94_32005
phnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein
 
     0.423
WL94_32000
phnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily
 
    0.416
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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