Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1812 | DM42_1815 | DM42_1812 | DM42_1815 | annotation not available | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | 0.861 |
DM42_1812 | DM42_3905 | DM42_1812 | DM42_3905 | annotation not available | phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase | 0.933 |
DM42_1812 | PhnA | DM42_1812 | DM42_5480 | annotation not available | hydr_PhnA: phosphonoacetate hydrolase | 0.552 |
DM42_1812 | PhnW | DM42_1812 | DM42_5475 | annotation not available | 2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation | 0.805 |
DM42_1812 | PhnY | DM42_1812 | DM42_5481 | annotation not available | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family | 0.933 |
DM42_1812 | aepY | DM42_1812 | DM42_3847 | annotation not available | ppyr-DeCO2ase: phosphonopyruvate decarboxylase | 0.949 |
DM42_1812 | phnA | DM42_1812 | DM42_1816 | annotation not available | hydr_PhnA: phosphonoacetate hydrolase | 0.691 |
DM42_1812 | phnW | DM42_1812 | DM42_3848 | annotation not available | 2-aminoethylphosphonate aminotransferase family protein; Involved in phosphonate degradation | 0.844 |
DM42_1812 | phnY | DM42_1812 | DM42_1817 | annotation not available | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family | 0.950 |
DM42_1815 | DM42_1812 | DM42_1815 | DM42_1812 | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | annotation not available | 0.861 |
DM42_1815 | PhnW | DM42_1815 | DM42_5475 | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | 2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation | 0.721 |
DM42_1815 | phnA | DM42_1815 | DM42_1816 | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | hydr_PhnA: phosphonoacetate hydrolase | 0.652 |
DM42_1815 | phnW | DM42_1815 | DM42_3848 | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | 2-aminoethylphosphonate aminotransferase family protein; Involved in phosphonate degradation | 0.458 |
DM42_1815 | phnY | DM42_1815 | DM42_1817 | phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family | 0.524 |
DM42_1818 | phnA | DM42_1818 | DM42_1816 | Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family | hydr_PhnA: phosphonoacetate hydrolase | 0.436 |
DM42_1818 | phnY | DM42_1818 | DM42_1817 | Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family | 0.524 |
DM42_3905 | DM42_1812 | DM42_3905 | DM42_1812 | phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase | annotation not available | 0.933 |
DM42_3905 | PhnA | DM42_3905 | DM42_5480 | phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase | hydr_PhnA: phosphonoacetate hydrolase | 0.956 |
DM42_3905 | PhnW | DM42_3905 | DM42_5475 | phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase | 2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation | 0.932 |
DM42_3905 | PhnY | DM42_3905 | DM42_5481 | phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family | 0.804 |
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