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DM42_1823 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1823" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1823Conserved hypothetical protein (204 aa)    
Predicted Functional Partners:
DM42_5064
Conserved hypothetical protein (332 aa)
   
          0.674
WL94_22190
annotation not available (271 aa)
 
          0.659
DM42_393
Conserved hypothetical protein (580 aa)
   
          0.625
DM42_3426
annotation not available (321 aa)
   
          0.623
DM42_3599
annotation not available (292 aa)
   
          0.571
DM42_6318
annotation not available (408 aa)
   
          0.560
WL94_30015
annotation not available (249 aa)
   
          0.554
WL94_33020
annotation not available (315 aa)
   
          0.530
WL94_35770
annotation not available (189 aa)
   
          0.502
DM42_5825
annotation not available (2365 aa)
   
          0.470
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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