Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1828 | DM42_1829 | DM42_1828 | DM42_1829 | annotation not available | Conserved hypothetical protein | 0.850 |
DM42_1828 | DM42_1830 | DM42_1828 | DM42_1830 | annotation not available | Conserved hypothetical protein | 0.850 |
DM42_1828 | DM42_1831 | DM42_1828 | DM42_1831 | annotation not available | annotation not available | 0.849 |
DM42_1828 | DM42_1833 | DM42_1828 | DM42_1833 | annotation not available | annotation not available | 0.819 |
DM42_1828 | DM42_3529 | DM42_1828 | DM42_3529 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.840 |
DM42_1828 | dnaB | DM42_1828 | DM42_3231 | annotation not available | Replicative dna helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins | 0.947 |
DM42_1828 | polA | DM42_1828 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.774 |
DM42_1828 | priA | DM42_1828 | DM42_1670 | annotation not available | Primosomal protein n' (replication factor y) (superfamily ii helicase); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA | 0.840 |
DM42_1828 | recQ | DM42_1828 | DM42_1479 | annotation not available | recQ: ATP-dependent DNA helicase RecQ | 0.865 |
DM42_1828 | rph | DM42_1828 | DM42_839 | annotation not available | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | 0.843 |
DM42_1829 | DM42_1828 | DM42_1829 | DM42_1828 | Conserved hypothetical protein | annotation not available | 0.850 |
DM42_1829 | DM42_1830 | DM42_1829 | DM42_1830 | Conserved hypothetical protein | Conserved hypothetical protein | 0.845 |
DM42_1829 | DM42_1831 | DM42_1829 | DM42_1831 | Conserved hypothetical protein | annotation not available | 0.845 |
DM42_1830 | DM42_1828 | DM42_1830 | DM42_1828 | Conserved hypothetical protein | annotation not available | 0.850 |
DM42_1830 | DM42_1829 | DM42_1830 | DM42_1829 | Conserved hypothetical protein | Conserved hypothetical protein | 0.845 |
DM42_1830 | DM42_1831 | DM42_1830 | DM42_1831 | Conserved hypothetical protein | annotation not available | 0.845 |
DM42_1831 | DM42_1828 | DM42_1831 | DM42_1828 | annotation not available | annotation not available | 0.849 |
DM42_1831 | DM42_1829 | DM42_1831 | DM42_1829 | annotation not available | Conserved hypothetical protein | 0.845 |
DM42_1831 | DM42_1830 | DM42_1831 | DM42_1830 | annotation not available | Conserved hypothetical protein | 0.845 |
DM42_1833 | DM42_1828 | DM42_1833 | DM42_1828 | annotation not available | annotation not available | 0.819 |
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