STRINGSTRING
DM42_1841 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1841" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1841annotation not available (920 aa)    
Predicted Functional Partners:
DM42_1840
annotation not available (142 aa)
 
     
  0.964
DM42_1839
annotation not available (382 aa)
 
          0.963
DM42_1843
annotation not available (103 aa)
 
          0.902
DM42_1844
Tail_tube- phage major tail tube protein (169 aa)
 
          0.883
DM42_1845
annotation not available (390 aa)
 
          0.873
DM42_1615
annotation not available (143 aa)
 
     
  0.797
DM42_1863
annotation not available (228 aa)
   
     
  0.791
DM42_1616
annotation not available (356 aa)
 
          0.790
DM42_1612
annotation not available (123 aa)
 
          0.789
DM42_1867
portal_PBSX- phage portal protein, PBSX family (348 aa)
 
          0.783
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (18%) [HD]