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DM42_1854 protein (Burkholderia cepacia) - STRING interaction network
"DM42_1854" - tail_comp_S: phage virion morphogenesis protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1854tail_comp_S- phage virion morphogenesis protein (149 aa)    
Predicted Functional Partners:
DM42_1862
annotation not available (158 aa)
 
   
  0.976
DM42_1860
annotation not available (70 aa)
 
        0.970
DM42_1855
annotation not available (136 aa)
 
        0.970
DM42_1857
annotation not available (266 aa)
 
          0.954
DM42_1859
annotation not available (124 aa)
 
        0.952
DM42_1864
major_capsid_P2- phage major capsid protein, P2 family (339 aa)
 
        0.918
DM42_1863
annotation not available (228 aa)
 
        0.917
DM42_1865
annotation not available (273 aa)
 
        0.903
DM42_1867
portal_PBSX- phage portal protein, PBSX family (348 aa)
 
        0.884
DM42_1858
Conserved hypothetical protein (106 aa)
   
        0.879
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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