DM42_1858 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

DM42_1858

Conserved hypothetical protein (106 aa)

Predicted Functional Partners:

DM42_1859

0.906

DM42_1854

0.879

DM42_1862

0.863

DM42_1860

0.860

DM42_1855

0.857

DM42_1857

0.857

DM42_1856

0.849

DM42_1861

0.845

DM42_1863

0.581

DM42_1864

0.581

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DM42_1854	DM42_1855	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.970
DM42_1854	DM42_1856	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.866
DM42_1854	DM42_1857	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.954
DM42_1854	DM42_1858	tail_comp_S: phage virion morphogenesis protein	Conserved hypothetical protein	0.879
DM42_1854	DM42_1859	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.952
DM42_1854	DM42_1860	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.970
DM42_1854	DM42_1861	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.845
DM42_1854	DM42_1862	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.976
DM42_1854	DM42_1863	tail_comp_S: phage virion morphogenesis protein	annotation not available	0.917
DM42_1854	DM42_1864	tail_comp_S: phage virion morphogenesis protein	major_capsid_P2: phage major capsid protein, P2 family	0.918
DM42_1855	DM42_1854	annotation not available	tail_comp_S: phage virion morphogenesis protein	0.970
DM42_1855	DM42_1856	annotation not available	annotation not available	0.860
DM42_1855	DM42_1857	annotation not available	annotation not available	0.954
DM42_1855	DM42_1858	annotation not available	Conserved hypothetical protein	0.857
DM42_1855	DM42_1859	annotation not available	annotation not available	0.947
DM42_1855	DM42_1860	annotation not available	annotation not available	0.970
DM42_1855	DM42_1861	annotation not available	annotation not available	0.849
DM42_1855	DM42_1862	annotation not available	annotation not available	0.970
DM42_1855	DM42_1863	annotation not available	annotation not available	0.919
DM42_1855	DM42_1864	annotation not available	major_capsid_P2: phage major capsid protein, P2 family	0.918

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