STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_1858
Conserved hypothetical protein (106 aa)
Predicted Functional Partners:
DM42_1859
annotation not available
0.906
DM42_1854
tail_comp_S: phage virion morphogenesis protein
0.879
DM42_1862
annotation not available
0.863
DM42_1860
annotation not available
0.860
DM42_1855
annotation not available
0.857
DM42_1857
annotation not available
0.857
DM42_1856
annotation not available
0.849
DM42_1861
annotation not available
0.845
DM42_1863
annotation not available
0.581
DM42_1864
major_capsid_P2: phage major capsid protein, P2 family