Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_1881 | TopB | DM42_1881 | DM42_1880 | annotation not available | topB: DNA topoisomerase III family protein | 0.821 |
| DM42_1881 | lplT | DM42_1881 | DM42_3059 | annotation not available | annotation not available | 0.490 |
| DM42_3307 | DM42_7379 | DM42_3307 | DM42_7379 | annotation not available | annotation not available | 0.645 |
| DM42_3307 | TopB | DM42_3307 | DM42_1880 | annotation not available | topB: DNA topoisomerase III family protein | 0.711 |
| DM42_3307 | dnaN | DM42_3307 | DM42_1785 | annotation not available | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for proces [...] | 0.735 |
| DM42_3307 | polA | DM42_3307 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.946 |
| DM42_3307 | recA | DM42_3307 | DM42_2420 | annotation not available | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.702 |
| DM42_3307 | recQ | DM42_3307 | DM42_1479 | annotation not available | recQ: ATP-dependent DNA helicase RecQ | 0.780 |
| DM42_3573 | DM42_7379 | DM42_3573 | DM42_7379 | annotation not available | annotation not available | 0.645 |
| DM42_3573 | TopB | DM42_3573 | DM42_1880 | annotation not available | topB: DNA topoisomerase III family protein | 0.708 |
| DM42_3573 | dnaN | DM42_3573 | DM42_1785 | annotation not available | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for proces [...] | 0.735 |
| DM42_3573 | polA | DM42_3573 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.937 |
| DM42_3573 | recA | DM42_3573 | DM42_2420 | annotation not available | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.677 |
| DM42_3573 | recQ | DM42_3573 | DM42_1479 | annotation not available | recQ: ATP-dependent DNA helicase RecQ | 0.769 |
| DM42_7379 | DM42_3307 | DM42_7379 | DM42_3307 | annotation not available | annotation not available | 0.645 |
| DM42_7379 | DM42_3573 | DM42_7379 | DM42_3573 | annotation not available | annotation not available | 0.645 |
| DM42_7379 | TopB | DM42_7379 | DM42_1880 | annotation not available | topB: DNA topoisomerase III family protein | 0.707 |
| DM42_7379 | dnaN | DM42_7379 | DM42_1785 | annotation not available | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for proces [...] | 0.888 |
| DM42_7379 | polA | DM42_7379 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.999 |
| DM42_7379 | recA | DM42_7379 | DM42_2420 | annotation not available | Recombination protein reca; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.946 |
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