STRINGSTRING
WI67_16620 protein (Burkholderia cepacia) - STRING interaction network
"WI67_16620" - annotation not available in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_16620annotation not available (233 aa)    
Predicted Functional Partners:
WI67_16625
annotation not available (804 aa)
 
     
  0.980
WI67_16630
Uncharacterized protein (196 aa)
 
          0.952
sun
16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (463 aa)
              0.893
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family (305 aa)
       
  0.786
htpX
annotation not available (285 aa)
              0.637
WL94_32925
annotation not available (380 aa)
 
 
  0.614
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS) (99 aa)
   
          0.599
WL94_35035
annotation not available (694 aa)
   
          0.595
WI67_16670
topB- DNA topoisomerase III family protein (865 aa)
 
          0.586
WI67_16655
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (167 aa)
 
     
  0.586
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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