STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_16380Uncharacterized protein (70 aa)    
Predicted Functional Partners:
WI67_07380
DNA-binding protein
  
     0.784
WL94_28705
Uncharacterized protein
  
     0.782
DM42_6288
Conserved hypothetical protein
  
     0.782
WI67_24145
Uncharacterized protein
  
     0.781
WI67_27440
Uncharacterized protein
  
     0.781
WI67_16390
annotation not available
  
     0.780
WL94_13140
Purine-nucleoside phosphorylase
  
     0.780
WI67_29265
Purine-nucleoside phosphorylase
  
     0.778
WI67_15045
annotation not available
  
     0.775
DM42_7268
Conserved hypothetical protein
  
     0.775
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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