STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliEfliE: flagellar hook-basal body complex protein FliE (114 aa)    
Predicted Functional Partners:
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction
 
  
 0.974
fliG
fliG: flagellar motor switch protein FliG
 
 
 0.973
flgJ
flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ
 
  
 0.972
flgC
flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family
 
  
 0.967
flgK
flgK_ends: flagellar hook-associated protein FlgK
 
 
 0.963
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
 
 
 0.952
fliS
fliS: flagellar protein FliS
 
 
 0.947
DM42_1940
annotation not available
 
  
 0.940
fliJ
flagell_FliJ: flagellar export protein FliJ
 
  
 0.940
WI67_16345
annotation not available
 
  
 0.940
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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