STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uvrY_4annotation not available (218 aa)    
Predicted Functional Partners:
DM42_1955
annotation not available
 
 0.971
DM42_4874
annotation not available
 
 
 0.744
DM42_3595
annotation not available
 
 
 0.727
DM42_4469
annotation not available
 
 0.707
DM42_4916
annotation not available
 
 
 0.619
DM42_3158
annotation not available
 
 
 0.598
DM42_7279
Two-component system, ompr family, phosphate regulon response regulator ompr; Transcriptional regulatory , C terminal family protein
  
 
 0.528
cheY_1
annotation not available
 
 
 
 0.513
DM42_6257
annotation not available
  
   
 0.500
DM42_5872
Two-component system, ompr family, response regulator ader; Two-component system response regulator; Transcriptional regulatory , C terminal family protein
  
 
 
 0.497
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.