STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgRFlagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (251 aa)    
Predicted Functional Partners:
flgK
flgK_ends: flagellar hook-associated protein FlgK
 
  
 0.871
flgJ
flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ
 
  
 0.802
cheA
annotation not available
  
  
 0.788
DM42_1981
annotation not available
 
  
 0.772
flgL
flagell_flgL: flagellar hook-associated protein 3
 
  
 0.750
flgA
flgA_cterm: flagella basal body P-ring formation protein FlgA
 
  
 0.744
flgM
Negative regulator of flagellin synthesis flgm; flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM
 
  
 0.706
fliJ
flagell_FliJ: flagellar export protein FliJ
 
  
 0.692
fliG
fliG: flagellar motor switch protein FliG
  
 
 0.690
flgH
Flagellar l-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
 
  
 0.675
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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