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STRINGSTRING
DM42_2006 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2006" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2006annotation not available (143 aa)    
Predicted Functional Partners:
WI67_16010
Putative lipoprotein/NMB1162; putative lipoprotein NMB1124/NMB1162 (224 aa)
 
        0.971
WL94_22890
Curli production assembly protein CsgG; Putative lipoprotein/NMB1164; putative lipoprotein NMB1126/NMB1164 (225 aa)
 
        0.945
DM42_3377
Conserved hypothetical protein (491 aa)
   
          0.464
DM42_3386
annotation not available (221 aa)
   
          0.459
DM42_3388
annotation not available (393 aa)
   
          0.458
DM42_3387
Conserved hypothetical protein (117 aa)
   
          0.452
DM42_3385
Conserved hypothetical protein (322 aa)
   
          0.446
DM42_3378
Conserved hypothetical protein (146 aa)
   
          0.429
DM42_3376
Conserved hypothetical protein (196 aa)
   
          0.408
DM42_3389
Conserved hypothetical protein (220 aa)
   
          0.407
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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