Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CagE | DM42_2043 | DM42_2049 | DM42_2043 | annotation not available | Conserved hypothetical protein | 0.956 |
CagE | DM42_2044 | DM42_2049 | DM42_2044 | annotation not available | annotation not available | 0.974 |
CagE | DM42_2046 | DM42_2049 | DM42_2046 | annotation not available | annotation not available | 0.964 |
CagE | DM42_2050 | DM42_2049 | DM42_2050 | annotation not available | annotation not available | 0.971 |
CagE | DM42_2051 | DM42_2049 | DM42_2051 | annotation not available | annotation not available | 0.971 |
CagE | DM42_2053 | DM42_2049 | DM42_2053 | annotation not available | annotation not available | 0.968 |
CagE | TrbB | DM42_2049 | DM42_2052 | annotation not available | trbB_P: P-type conjugative transfer ATPase TrbB | 0.966 |
CagE | TrbG | DM42_2049 | DM42_2045 | annotation not available | trbG_Ti: P-type conjugative transfer protein TrbG | 0.968 |
CagE | TrbJ | DM42_2049 | DM42_2048 | annotation not available | trbJ_Ti: P-type conjugative transfer protein TrbJ | 0.969 |
CagE | TrbL | DM42_2049 | DM42_2047 | annotation not available | trbL_P: P-type conjugative transfer protein TrbL | 0.969 |
DM42_2043 | CagE | DM42_2043 | DM42_2049 | Conserved hypothetical protein | annotation not available | 0.956 |
DM42_2043 | DM42_2044 | DM42_2043 | DM42_2044 | Conserved hypothetical protein | annotation not available | 0.967 |
DM42_2043 | DM42_2046 | DM42_2043 | DM42_2046 | Conserved hypothetical protein | annotation not available | 0.965 |
DM42_2043 | DM42_2050 | DM42_2043 | DM42_2050 | Conserved hypothetical protein | annotation not available | 0.960 |
DM42_2043 | DM42_2051 | DM42_2043 | DM42_2051 | Conserved hypothetical protein | annotation not available | 0.960 |
DM42_2043 | DM42_2053 | DM42_2043 | DM42_2053 | Conserved hypothetical protein | annotation not available | 0.962 |
DM42_2043 | TrbB | DM42_2043 | DM42_2052 | Conserved hypothetical protein | trbB_P: P-type conjugative transfer ATPase TrbB | 0.925 |
DM42_2043 | TrbG | DM42_2043 | DM42_2045 | Conserved hypothetical protein | trbG_Ti: P-type conjugative transfer protein TrbG | 0.966 |
DM42_2043 | TrbJ | DM42_2043 | DM42_2048 | Conserved hypothetical protein | trbJ_Ti: P-type conjugative transfer protein TrbJ | 0.962 |
DM42_2043 | TrbL | DM42_2043 | DM42_2047 | Conserved hypothetical protein | trbL_P: P-type conjugative transfer protein TrbL | 0.963 |
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