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DM42_2153 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2153" - Uncharacterized protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2153Uncharacterized protein (107 aa)    
Predicted Functional Partners:
WL94_04960
annotation not available (384 aa)
   
          0.764
DM42_3538
annotation not available (393 aa)
   
          0.756
WI67_21510
annotation not available (269 aa)
   
          0.749
WL94_09640
annotation not available (359 aa)
   
          0.741
WL94_39270
annotation not available (375 aa)
   
          0.738
WI67_09765
annotation not available (585 aa)
   
          0.738
DM42_830
annotation not available (383 aa)
   
          0.731
WL94_26175
annotation not available (386 aa)
   
          0.727
WI67_02505
annotation not available (383 aa)
   
          0.721
WI67_29390
annotation not available (379 aa)
   
          0.719
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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