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DM42_2157 protein (Burkholderia cepacia) - STRING interaction network
"DM42_2157" - Uncharacterized protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_2157Uncharacterized protein (85 aa)    
Predicted Functional Partners:
DM42_2158
Conserved hypothetical protein (399 aa)
 
          0.832
WI67_02915
annotation not available (187 aa)
   
          0.779
WI67_13185
DUF3460 domain-containing protein (62 aa)
   
          0.776
WL94_02815
annotation not available (215 aa)
   
          0.775
WL94_24225
Uncharacterized protein (139 aa)
   
          0.769
WI67_05165
annotation not available (155 aa)
   
          0.766
WI67_21820
Uncharacterized protein (170 aa)
   
          0.737
WL94_20830
Uncharacterized protein (193 aa)
   
          0.733
WL94_13695
annotation not available (190 aa)
   
          0.713
WI67_21860
annotation not available (89 aa)
   
          0.710
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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