Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM42_1096 | DM42_1728 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.545 |
DM42_1096 | DM42_1881 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.494 |
DM42_1096 | DM42_2162 | Hypothetical protein; Uncharacterized protein | Conserved hypothetical protein | 0.633 |
DM42_1096 | DM42_2174 | Hypothetical protein; Uncharacterized protein | Cholesterol transport system auxiliary component; ABC transporter | 0.512 |
DM42_1728 | DM42_1096 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.545 |
DM42_1728 | DM42_1881 | annotation not available | annotation not available | 0.663 |
DM42_1728 | DM42_2162 | annotation not available | Conserved hypothetical protein | 0.569 |
DM42_1728 | DM42_2174 | annotation not available | Cholesterol transport system auxiliary component; ABC transporter | 0.549 |
DM42_1881 | DM42_1096 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.494 |
DM42_1881 | DM42_1728 | annotation not available | annotation not available | 0.663 |
DM42_1881 | DM42_2162 | annotation not available | Conserved hypothetical protein | 0.761 |
DM42_1881 | DM42_2174 | annotation not available | Cholesterol transport system auxiliary component; ABC transporter | 0.546 |
DM42_2162 | DM42_1096 | Conserved hypothetical protein | Hypothetical protein; Uncharacterized protein | 0.633 |
DM42_2162 | DM42_1728 | Conserved hypothetical protein | annotation not available | 0.569 |
DM42_2162 | DM42_1881 | Conserved hypothetical protein | annotation not available | 0.761 |
DM42_2162 | DM42_2174 | Conserved hypothetical protein | Cholesterol transport system auxiliary component; ABC transporter | 0.519 |
DM42_2162 | DM42_2175 | Conserved hypothetical protein | annotation not available | 0.402 |
DM42_2171 | DM42_2172 | Phospholipid/cholesterol/gamma-hch transport system permease protein; ABC transporter permease | annotation not available | 0.996 |
DM42_2171 | DM42_2173 | Phospholipid/cholesterol/gamma-hch transport system permease protein; ABC transporter permease | annotation not available | 0.993 |
DM42_2171 | DM42_2174 | Phospholipid/cholesterol/gamma-hch transport system permease protein; ABC transporter permease | Cholesterol transport system auxiliary component; ABC transporter | 0.876 |
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