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STRINGSTRING
WI67_15435 protein (Burkholderia cepacia) - STRING interaction network
"WI67_15435" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_15435annotation not available (436 aa)    
Predicted Functional Partners:
dacB
PBP4- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (510 aa)
       
  0.890
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (756 aa)
 
 
  0.872
WL94_32680
annotation not available (739 aa)
       
  0.840
WL94_25830
PBP_1a_fam- penicillin-binding , 1A family protein (709 aa)
       
  0.840
WL94_11605
annotation not available (849 aa)
         
  0.832
WL94_31175
PBP_1a_fam- penicillin-binding , 1A family protein (840 aa)
         
  0.832
WL94_15740
PBP_1a_fam- penicillin-binding , 1A family protein (795 aa)
         
  0.832
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (382 aa)
 
 
  0.825
WL94_37010
annotation not available (942 aa)
       
    0.803
WI67_15425
UPF0250 protein CEQ23_14195; Belongs to the UPF0250 family (102 aa)
   
        0.799
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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