Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alr | alr | DM42_3887 | DM42_3060 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids | 0.805 |
Alr | dat | DM42_3887 | DM42_2179 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids | annotation not available | 0.917 |
Alr | ddlB | DM42_3887 | DM42_1278 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids | D-alanine--d-alanine ligase b; Cell wall formation | 0.955 |
Alr | putA | DM42_3887 | DM42_1669 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids | Rhh-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.400 |
DM42_2856 | DM42_3611 | DM42_2856 | DM42_3611 | annotation not available | annotation not available | 0.807 |
DM42_2856 | DM42_5847 | DM42_2856 | DM42_5847 | annotation not available | Hydroxycarboxylate dehydrogenase b; Belongs to the LDH2/MDH2 oxidoreductase family | 0.910 |
DM42_2856 | dat | DM42_2856 | DM42_2179 | annotation not available | annotation not available | 0.913 |
DM42_2856 | hisC | DM42_2856 | DM42_2264 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_2856 | hisC2 | DM42_2856 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_2856 | hppD | DM42_2856 | DM42_1508 | annotation not available | 4HPPD: 4-hydroxyphenylpyruvate dioxygenase | 0.926 |
DM42_2856 | putA | DM42_2856 | DM42_1669 | annotation not available | Rhh-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.649 |
DM42_3611 | DM42_2856 | DM42_3611 | DM42_2856 | annotation not available | annotation not available | 0.807 |
DM42_3611 | DM42_5847 | DM42_3611 | DM42_5847 | annotation not available | Hydroxycarboxylate dehydrogenase b; Belongs to the LDH2/MDH2 oxidoreductase family | 0.910 |
DM42_3611 | dat | DM42_3611 | DM42_2179 | annotation not available | annotation not available | 0.913 |
DM42_3611 | hisC | DM42_3611 | DM42_2264 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_3611 | hisC2 | DM42_3611 | DM42_1395 | annotation not available | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily | 0.825 |
DM42_3611 | hppD | DM42_3611 | DM42_1508 | annotation not available | 4HPPD: 4-hydroxyphenylpyruvate dioxygenase | 0.926 |
DM42_3611 | putA | DM42_3611 | DM42_1669 | annotation not available | Rhh-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.649 |
DM42_5847 | DM42_2856 | DM42_5847 | DM42_2856 | Hydroxycarboxylate dehydrogenase b; Belongs to the LDH2/MDH2 oxidoreductase family | annotation not available | 0.910 |
DM42_5847 | DM42_3611 | DM42_5847 | DM42_3611 | Hydroxycarboxylate dehydrogenase b; Belongs to the LDH2/MDH2 oxidoreductase family | annotation not available | 0.910 |
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