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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_25505Uncharacterized protein (101 aa)    
Predicted Functional Partners:
actP
Cation acetate symporter; Sss: transporter, solute:sodium symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family
 
  
 0.986
DM42_6492
Sss: transporter, solute:sodium symporter family protein
 
  
 0.951
WL94_19635
Cation acetate symporter; Na_symport_lg: putative sodium:solute symporter, VC_2705 subfamily protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family
 
  
 0.750
WL94_25500
annotation not available
       0.579
WL94_25485
annotation not available
  
    0.537
WL94_25495
Pimeloyl-CoA dehydrogenase small subunit; acyl-CoA dehydrogenase, N-terminal domain protein
  
    0.522
WL94_25490
Pimeloyl-CoA dehydrogenase large subunit; acyl-CoA dehydrogenase, N-terminal domain protein
  
    0.504
dctA
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane
  
    0.429
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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